Internship and thesis proposals
Single cell phototaxis in the model micro-alga Chlamydomonas reinhardtii

Domaines
Biophysics
Soft matter
Physics of living systems
Non-equilibrium Statistical Physics
Hydrodynamics/Turbulence/Fluid mechanics

Type of internship
Expérimental et théorique
Description
We propose a M2 research internship at the physics department of ENS (LPENS, UMR 8023) aiming to better characterize the mechanism by which the unicellular micro-alga Chlamydomonas reinhardtii performs phototaxis, which is the ability to navigate in light fields, a still poorly understood process. In particular we will aim to understand how the dynamic light signal arriving on the eyespot (the light detector of the cell) is interpreted by the cell to reorient in the correct direction thanks to the differential beating of its two flagella. This study will be based on microscopy techniques to visualize at the same time the eyespot of the cell and the body, and observe the trajectories of the cells in well-controlled light fields (static and dynamic). We will then correlate the body motion and reorientation to the inferred light signal on the eyespot and build a theoretical model to account for the experimental observations. An originality in this study will be the use of multiple light sources, as opposed to all physical studies on phototaxis so far that made use of a single light source. Mounting the full setup will be part of the internship. The intern will use optics, video-microscopy, image analysis, basic microalgal culturing techniques, microfluidic techniques and statistical analysis of the experimental data as well as apply theoretical concepts from Statistical Physics.
Contact
Raphaël Jeanneret
Laboratory : LPENS - UMR8023
Team : Multiscale physics of biological systems
Team Website
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